2024
- Wiewiórka M., Sitek W., Małanij R. & Gambin T. (2024). PhenoAgent - Agent-based architecture for high-throughput deep phenotyping with Large Language Models, Symposium of the Polish Bioinformatics Society, Warsaw, Poland, Sep 13, 2024[pdf
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2023
- Wiewiórka M. (2023). Distributed algorithms and computational methods for scalable processing of high-throughput sequencing data, PhD thesis, [pdf
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- Wiewiórka M., Szmurło A., Stankiewicz P. & Gambin T. (2023). Cloud-native distributed genomic pileup operations. Bioinformatics, 39(1),[pdf
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2019
- Wiewiórka M., Szmurło, A., Kuśmirek W. & Gambin T. (2019). SeQuiLa-cov: A fast and scalable library for depth of coverage calculations. GigaScience, 8(8), giz094.[pdf
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- Wiewiórka M., Leśniewska A., Szmurło A., Stępień K., Borowiak M., Okoniewski M. & Gambin T. (2019). SeQuiLa: an elastic, fast and scalable SQL-oriented solution for processing and querying genomic intervals. Bioinformatics, 35(12), 2156-2158.[pdf
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2017
- Wiewiórka M. S., Wysakowicz D. P., Okoniewski M. J. & GambinT. (2017). Benchmarking distributed data warehouse solutions for storing genomic variant information. Database, 2017, bax049. [pdf
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